adegenetServer

The function <code>adegenetServer</code> opens up a web page providing a
 simple user interface for some of the functionalities implemented in
 adegenet. These servers have been developed using the package
 <code>shiny</code>. 
Currently available servers include:<ul>
<li><code>DAPC</code>: a server for the Discriminant Analysis of
 Principal Components (see ?dapc)</li>
</ul>

Adegenet servers

Toolset for the exploration of genetic and genomic
data. Adegenet provides formal (S4) classes for storing and handling
various genetic data, including genetic markers with varying ploidy
and hierarchical population structure ('genind' class), alleles counts
by populations ('genpop'), and genome-wide SNP data ('genlight'). It
also implements original multivariate methods (DAPC, sPCA), graphics,
statistical tests, simulation tools, distance and similarity measures,
and several spatial methods. A range of both empirical and simulated
datasets is also provided to illustrate various methods.

Zhian N. Kamvar

adegenet

Exploratory Analysis of Genetic and Genomic Data

Thibaut Jombart

Caitlin Collins

Roman Lustrik

Marie-Pauline Beugin

Brian J. Knaus

Peter Solymos

Vladimir Mikryukov

Klaus Schliep

Tiago Maié

Libor Morkovsky

Ismail Ahmed

Anne Cori

Federico Calboli

RJ Ewing

Frédéric Michaud

Rebecca DeCamp

Alexandre Courtiol

Lindsay V. Clark

Pavel Dimens

Adegenet servers function

<dl> <dt>what</dt>
<dd>a character string indicating which server to start;
 currently accepted values are: "DAPC"</dd></dl>

Arguments

Thibaut Jombart <a href="/link/t.jombart%40imperial.ac.uk?package=adegenet&version=2.1.8" data-mini-rdoc="adegenet::t.jombart@imperial.ac.uk">t.jombart@imperial.ac.uk</a>
 Caitlin Collins

Author

The function <code>adegenetServer</code> opens up a web page providing a
 simple user interface for some of the functionalities implemented in
 adegenet. These servers have been developed using the package
 <code>shiny</code>. 
Currently available servers include:<ul>
<li><code>DAPC</code>: a server for the Discriminant Analysis of
 Principal Components (see ?dapc)</li>
</ul>

Web servers for adegenet — Adegenet servers

<dl>

 <dt>what</dt>
<dd>a character string indicating which server to start;
 currently accepted values are: "DAPC"</dd>

</dl>

Thibaut Jombart <a href='mailto:t.jombart@imperial.ac.uk'>t.jombart@imperial.ac.uk</a>
 Caitlin Collins

Web servers for adegenet

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Adegenet servers: Web servers for adegenet

Description

Usage

Value

Arguments

Author

See Also

Examples